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ABOUT THIS RECORD
ID:
MNEST002277
species:
Pseudoroegneria spicata
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Pseudoroegneria spicata
Pseudoroegneria
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCTCCGTCCCAAAATAAGTGT
miRNA*
ACTTATTTTAGGACGGAGGGA
mismatches:
1
bulges:
0
View larger
pre-miRNA
TAGATATATACTACTC
CCTCCGTCCCAAAATAAGTGT
CTCAAGTTTAAACTTGAGACGAGAC
ACTTATTTTAGGACGGAGGGA
GTATATAGTAGAT
dot-bracket secondary structure
......((((.(((((
(((((((((.(((((((((((
(((..((((.......)))))))))
))))))))).)))))))))))
)))))))......
SIMILARITIES
miRBase
far-MIR1122
:
0.0000003
PMRD
hpr-miR1120
:
0.000000000000001
microPC
miR1439
:
0.000000005
UniProt
no hits
RFAM
MIR1122: 0.0000000003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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