miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST002277
species: Pseudoroegneria spicata
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCTCCGTCCCAAAATAAGTGT

miRNA*
ACTTATTTTAGGACGGAGGGA

mismatches: 1
bulges: 0

View larger
pre-miRNA
TAGATATATACTACTCCCTCCGTCCCAAAATAAGTGTCTCAAGTTTAAACTTGAGACGAGACACTTATTTTAGGACGGAGGGAGTATATAGTAGAT

dot-bracket secondary structure
......((((.((((((((((((((.((((((((((((((..((((.......)))))))))))))))))).))))))))))))))))))......


SIMILARITIES
miRBase far-MIR1122: 0.0000003

PMRD hpr-miR1120: 0.000000000000001

microPC miR1439: 0.000000005
UniProt no hits

RFAM MIR1122: 0.0000000003
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;