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ABOUT THIS RECORD

ID: MNEST002278
species: Pseudoroegneria spicata
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACTACTCCCTCCGTCCCAAA

miRNA*
TAGGACGGAGGGAGTATATA

mismatches: 1
bulges: 1

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pre-miRNA
TAGATATATACTACTCCCTCCGTCCCAAAATAAGTGTCTCAAGTTTAAACTTGAGACGAGACACTTATTTTAGGACGGAGGGAGTATATAGTAGA

dot-bracket secondary structure
......((((.((((((((((((((.((((((((((((((..((((.......)))))))))))))))))).)))))))))))))))))).....


SIMILARITIES
miRBase far-MIR1122: 0.0000003

PMRD hpr-miR1120: 0.000000000000001

microPC miR1439: 0.000000005
UniProt no hits

RFAM MIR1122: 0.0000000003
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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