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ABOUT THIS RECORD

ID: MNEST002280
species: Pseudoroegneria spicata
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACTCCCTCCGTCCCATAATAG

miRNA*
ATTATGGGACGGAAGGAGTAG

mismatches: 2
bulges: 0

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pre-miRNA
TCTGAGTTCAGAGCTACTCCCTCCGTCCCATAATAGTGTCAAAAAAGCTCTTATATTATGGGACGGAAGGAGTAGTTCTATTGAGCA

dot-bracket secondary structure
.....(((((((((((((((.((((((((((((((..((.......)).....)))))))))))))).))))))))))...))))).


SIMILARITIES
miRBase tae-MIR1120: 0.00000007

PMRD tae-miR1120: 0.00000007

microPC miR1436: 0.00000007
UniProt no hits

RFAM MIR1122: 0.000000000000001
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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