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ABOUT THIS RECORD
ID:
MNEST002282
species:
Pseudoroegneria spicata
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Pseudoroegneria spicata
Pseudoroegneria
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCATCCCAAAATG
miRNA*
TTATGGGACGGATGGAGTAGT
mismatches:
3
bulges:
0
View larger
pre-miRNA
ACAATAAAATC
TACTCCCTCCATCCCAAAATG
TAAGACGTTTTTGTTCAAAAAACGTCTTACATTATGGACCAAAAACGTCTTACA
TTATGGGACGGATG
GAGTAGT
AATTTGGG
dot-bracket secondary structure
.(((......(
((((((.(((.(((((.((((
(((((((((((((((((.((...........)).)))).)))))))))))))))
)).))))).))).)
)))))).
...)))..
SIMILARITIES
miRBase
tae-MIR1130
:
0.00000002
PMRD
tae-miR1130
:
0.00000002
microPC
miR1436
:
3e-17
UniProt
no hits
RFAM
MIR1122: 0.00000003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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