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ABOUT THIS RECORD

ID: MNEST002282
species: Pseudoroegneria spicata
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACTCCCTCCATCCCAAAATG

miRNA*
TTATGGGACGGATGGAGTAGT

mismatches: 3
bulges: 0

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pre-miRNA
ACAATAAAATCTACTCCCTCCATCCCAAAATGTAAGACGTTTTTGTTCAAAAAACGTCTTACATTATGGACCAAAAACGTCTTACATTATGGGACGGATG
GAGTAGT
AATTTGGG


dot-bracket secondary structure
.(((......(((((((.(((.(((((.(((((((((((((((((((((.((...........)).)))).))))))))))))))))).))))).))).)
)))))).
...)))..



SIMILARITIES
miRBase tae-MIR1130: 0.00000002

PMRD tae-miR1130: 0.00000002

microPC miR1436: 3e-17
UniProt no hits

RFAM MIR1122: 0.00000003
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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