ABOUT THIS RECORDspecies: Pseudoroegneria spicata
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACTACCTCCGTCCCAAAATA miRNA* TTTTGGGACGGGGGTAGTATA mismatches: 0 bulges: 0 |
pre-miRNA
CATTAGGAAATACTACCTCCGTCCCAAAATATAAGACGTTGCAGTTCAAATTTGAACTGCAAAAACGTCTTATATTTTGGGACGGGGGTAGTATATTTCA
AG
dot-bracket secondary structure
.....(((((((((((((((((((((((((((((((((((((((((((....)))))))))...)))))))))))))))))))))))))))))).)))).
..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CATTAGGAAATACTACCTCCGTCCCAAAATATAAGACGTTGCAGTTCAAATTTGAACTGCAAAAACGTCTTATATTTTGGGACGGGGGTAGTATATTTCA
AG
dot-bracket secondary structure
.....(((((((((((((((((((((((((((((((((((((((((((....)))))))))...)))))))))))))))))))))))))))))).)))).
..
SIMILARITIES| miRBase osa-MIR1439: 0.0000003 PMRD osa-miR1439: 0.0000003 microPC miR1439: 0.000005 | UniProt no hits RFAM MIR1122: 0.00000000002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
