miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST002302
species: Quercus petraea
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Quercus petraea Quercus Fagaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTCTTCCTCTTCCTCATCTT

miRNA*
 GAAGAAGAAGAAGAAGAAGAAG

mismatches: 3
bulges: 1
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pre-miRNA
 CATCCTCCTCCTCCTCTTTCTTCTCTTCCTCTTCCTCATCTTCTTCCGGAGGATCATATGGCAATGGAGGTGGTAATGGTGTTTTCATAGGGCTAAACTG
GGGGAATATATCAGGTCTACGCCCTGGTTTTGGCCTCTCCCACTCGATGGGGAAATCGAGAGGATTACGGCGCGTGAGTTTCTCTTCATCGGGAGCCATA
CGGACCACTTGCCTCTTTGCCCTCAAAAGATGAGTTGAAACCACGCGCTGAGAATCGAACATTGGAATTGAGCATCTGCAGCGAACGAAGCACGCGTCGC
CCACAGAAGAAGAAGAAGAAGAAGAAGAAGATGGGGATGAAGTCGAAG

dot-bracket secondary structure
........((.(((((..((((((((((.(((((.((.((((((..((((...(((.....(((((.((.((((.((((.....))))...))))..))(
(((((.((.((((((.......))))))..))...)))))).((((((......))))))..((((.(((((((((.(((((..((((((..(((...((
.(((.........))).))..)))....))))))..))))))))))))))..))))...)))))....)))...))))..((((.((.......))))))
....)))))).)).))))).)))).)))))).))))).))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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