ABOUT THIS RECORDspecies: Quercus petraea
miRNA family: MIR1510
source: miRNEST
Taxonomy by NCBI:
Quercus petraea Quercus Fagaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGGAGGAATAGGTAAAACAAC miRNA* TGTTTACAGTATGATTTCCAA mismatches: 3 bulges: 2 |
pre-miRNA
ATTCGGGGAATGGGAGGAATAGGTAAAACAACTCTAGCAAGAGTTGTTTACAGTATGATTTCCAATCAATTTG
dot-bracket secondary structure
.......((.((((((..(((.(((((.(((((((....))))))))))))..)))..)))))).))......
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATTCGGGGAATGGGAGGAATAGGTAAAACAACTCTAGCAAGAGTTGTTTACAGTATGATTTCCAATCAATTTG
dot-bracket secondary structure
.......((.((((((..(((.(((((.(((((((....))))))))))))..)))..)))))).))......
SIMILARITIES| miRBase gso-MIR1510a: 0.00001 PMRD gma-miR1510a: 0.00001 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
