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ABOUT THIS RECORD
ID:
MNEST002304
species:
Quercus petraea
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Quercus petraea
Quercus
Fagaceae
Fagales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCGTCATCGTCATCATCG
miRNA*
GTGGTGATGGTGGTGATGAAG
mismatches:
0
bulges:
0
View larger
pre-miRNA
AGACCTTATCA
TCATCGTCATCGTCATCATCG
AAGGTGGTTGCTGGTGGTCCCTACTTGCCGCCGGTAGCCGGTAAGAAACTTGCTCGCAGTAGGAGGGG
AGTTCTGGTACTCAAAGCCTTTTCTTCTTCTTCTTCTTCTTCGTCGTCGGCAGTGGTGGAAGGAGACTCCTCCTCCTCCTCCGTGAGTTTATTGGAGCGT
TGCTTGGCAGCGCCACCGGCTGTTTCTTCTTCTTCTATGCTGAGTCCGGTTATGAAAGGGCAGTACGGTGCGTTTGGTGCGGTTACCTTGGAGAAAGGCA
AGCTTGATACGTCCCAGAAGCAATCCCAGTCTAGCCCCGAGACTGCAATCGGGGGAGGTGGTGGAGATATTGGAAAGAAAATAAATCATGGTG
GTGGTGA
TGGTGGTGATGAAG
ATGGTGAT
dot-bracket secondary structure
..(((..(((.
(((((((((((((((((((((
...(((((((((((((((........))))))))).((.((((((...)))))).))...((((((((
((....(((.......)))..))))))))))(((((((((...(((.......))).)))))))))((((.((.(((((((((.(.((((.((((.((((
.(((((((.((((((.(((((((..((.(((.(((...((((....))))...))).))).)).))))).))..)))))).))..((((.....))))))
))).....)))).)))))))).....((((((.......)))))))...))))))))).)).)))).((((........))))))))))..))
)))))))
)))))))))))).)
)))))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-598: 0.00003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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