miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST002304
species: Quercus petraea
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Quercus petraea Quercus Fagaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCGTCATCGTCATCATCG

miRNA*
GTGGTGATGGTGGTGATGAAG

mismatches: 0
bulges: 0

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pre-miRNA
AGACCTTATCATCATCGTCATCGTCATCATCGAAGGTGGTTGCTGGTGGTCCCTACTTGCCGCCGGTAGCCGGTAAGAAACTTGCTCGCAGTAGGAGGGG
AGTTCTGGTACTCAAAGCCTTTTCTTCTTCTTCTTCTTCTTCGTCGTCGGCAGTGGTGGAAGGAGACTCCTCCTCCTCCTCCGTGAGTTTATTGGAGCGT
TGCTTGGCAGCGCCACCGGCTGTTTCTTCTTCTTCTATGCTGAGTCCGGTTATGAAAGGGCAGTACGGTGCGTTTGGTGCGGTTACCTTGGAGAAAGGCA
AGCTTGATACGTCCCAGAAGCAATCCCAGTCTAGCCCCGAGACTGCAATCGGGGGAGGTGGTGGAGATATTGGAAAGAAAATAAATCATGGTGGTGGTGA
TGGTGGTGATGAAG
ATGGTGAT


dot-bracket secondary structure
..(((..(((.(((((((((((((((((((((...(((((((((((((((........))))))))).((.((((((...)))))).))...((((((((
((....(((.......)))..))))))))))(((((((((...(((.......))).)))))))))((((.((.(((((((((.(.((((.((((.((((
.(((((((.((((((.(((((((..((.(((.(((...((((....))))...))).))).)).))))).))..)))))).))..((((.....))))))
))).....)))).)))))))).....((((((.......)))))))...))))))))).)).)))).((((........))))))))))..)))))))))
)))))))))))).)
)))))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-598: 0.00003
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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