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ABOUT THIS RECORD
ID:
MNEST002316
species:
Quercus robur
miRNA family:
miR827
source:
miRNEST
Taxonomy by NCBI:
Quercus robur
Quercus
Fagaceae
Fagales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATTCTTGGTGGTCATTTAATG
miRNA*
TTATCTTGATTAATGGGTGTGT
mismatches:
5
bulges:
1
View larger
pre-miRNA
TTAAAAGGGATTTGGTTTGTATTTGTGAGG
TTATCTTGATTAATGGGTGTGT
ATA
ATTCTTGGTGGTCATTTAATG
TTATGTATTCCCCAAGCCTTTTTG
AAA
dot-bracket secondary structure
(((((((((.(((((...((((..((((.(
(((...((((((.((((.((..
...
)).)))).))))))..)))).
))))))))...)))))))))))))
)..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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