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ABOUT THIS RECORD

ID: MNEST002362
species: Raphanus raphanistrum subsp. landra
miRNA family: MIR838
source: miRNEST

Taxonomy by NCBI:
Raphanus raphanistrum subsp. landra Raphanus raphanistrum Raphanus Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTTCTTCTTCTTCTTCCATT

miRNA*
TGTAGTCAGGAGGAGAAAGTG

mismatches: 2
bulges: 2

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pre-miRNA
TTCGATTAGAGATGTAGTCAGGAGGAGAAAGTGGGACTGAAGAATCATATTCACAATCCTCAAGATCTTCATATCCCCAAAACTCTTCTTTATTTTCTTC
TTCTTCTTCCATT
TTCCATTTT


dot-bracket secondary structure
........((((((.((..(((((((((((((((((.((((((.((.................))))))))..))))..............)))))))))
)))).))..))))
)).......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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