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ABOUT THIS RECORD

ID: MNEST002393
species: Raphanus sativus
miRNA family: MIRf20
source: miRNEST

Taxonomy by NCBI:
Raphanus sativus Raphanus Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAAGACTTCGAAGCTGGCTG

miRNA*
GACCTGTTCTGAAGCTCTATC

mismatches: 4
bulges: 2

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pre-miRNA
ACGTTTCCGGTTCCATTCCTATGAAGACTTCGAAGCTGGCTGTGATATGAAAGGTGATCTTTTCGGGGACCTGTTCTGAAGCTCTATCTTTGGGACCAAG
CTGCTG


dot-bracket secondary structure
........(((((((.....(((.((.(((((.(((.((((......(((((((....))))))).)).)).))).))))))).)))...)))))))...
......



SIMILARITIES
miRBase cel-mir-2: 0.00008

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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