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ABOUT THIS RECORD

ID: MNEST002448
species: Saccharum hybrid cultivar CoS 767
miRNA family: MIR444
source: miRNEST

Taxonomy by NCBI:
Saccharum hybrid cultivar CoS 767 Saccharum hybrid cultivar Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGTGGCTTTCTTGCAAGTTG

miRNA*
ACTTGCAAGAAAGTCACAAAA

mismatches: 1
bulges: 0

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pre-miRNA
GGTGGCACCAAGCATGAGGCAGGAACTGCATTACTTGCAAGAAAGTCACAAAATCAATTGCAAGATCATACTTGTGGCTTTCTTGCAAGTTGTGCAGTTG
TTGCCTCAAGCTTGCTGCCTC


dot-bracket secondary structure
...((((.(((((.((((((((.((((((((.(((((((((((((((((((.....(((....))).....))))))))))))))))))).)))))))).
)))))))).))))).))))..



SIMILARITIES
miRBase ssp-MIR444b: 4e-53

PMRD osa-miR444f: 2e-18

microPC miR444: 1e-44
UniProt no hits

RFAM MIR444: 2e-46
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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