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ABOUT THIS RECORD

ID: MNEST002449
species: Saccharum hybrid cultivar CoS 767
miRNA family: MIR437
source: miRNEST

Taxonomy by NCBI:
Saccharum hybrid cultivar CoS 767 Saccharum hybrid cultivar Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GAAGTTAGAGAAGTTTGACAT

miRNA*
GTCAAAACTTTTCTAACTTTGA

mismatches: 2
bulges: 1

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pre-miRNA
TAAGAAACAGCCAATGATACTCCTCCTTTTCTAAAATGCAGGGCGTTTTACTTTTGTCCTAAGTCAAAACTTTTCTAACTTTGAACAATTTTATAGAAAA
ATATATTGACATCTACAATACCAAATAAGCGCACTGTCAAGACATTTCATGGTGGATTTAATGAAGCTAATTTGATGTTTCAGATGTCTGTGCAATGTTC
TATACACAGTGAAGTTAGAGAAGTTTGACATCGGGCAAAAATAAAATGACATACATTTTTGAATGGTTGGGGTAGTATACAATGGACTAC


dot-bracket secondary structure
........(((((.((.((((((.((..(((.((((((.....(((((((.((((((((...((((((.((((((((((((((........(((((((..
...(((.(((((((..((((.(((((.(((.((...(((...(((...))).)))......))..))).))))).))))..))))))).))).....)))
)))).....))))))))))))))))))))...)))))))).))))))).....)))))).))).))..)))))).....)).))).))..



SIMILARITIES
miRBase sbi-MIR437f: 5e-21

PMRD sbi-miR437f: 5e-21

microPC miR437: 0.00000002
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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