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ABOUT THIS RECORD

ID: MNEST002467
species: Saccharum officinarum
miRNA family: MIRf75
source: miRNEST

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CACGAGACGAATCTTTTGAGC

miRNA*
AAAAGATTTAACTAATGAC

mismatches: 4
bulges: 2

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pre-miRNA
AGGTAAAAGATTTAACTAATGACACAGTTTGGTTGTAAATCACGAGACGAATCTTTTGAGCCCAATTAGT

dot-bracket secondary structure
.((((((((((((..((..(((.((((.....))))...)))..))..)))))))))..)))........


SIMILARITIES
miRBase osa-MIR2124a: 0.00000001

PMRD osa-miRf11301-akr: 0.000000003

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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