miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST002471
species: Saccharum officinarum
miRNA family: MIRf88
source: miRNEST

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CATCTTTAGCCCCGATTGGAA

miRNA*
CCACTTGGGACTAGAGATCTT

mismatches: 5
bulges: 0

View larger
pre-miRNA
AAACGCCGGGAGCCTTTAGTCCCGGTGGAGCCACGACCGGNGACTAAAGGACATCTTTAGCCCCGATTGGAACCACCACTTGGGACTAGAGATCTTTAAT
CCCAGGCTCTTTATATTTGTCTTGTGATGTGC


dot-bracket secondary structure
....(((((((.((((((((((((((.........))))).)))))))))..((((((((.(((((.(((.....))).))))).))))))))......)
))).)))....((((((........)))))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record





Liczniki na strone;