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ABOUT THIS RECORD
ID:
MNEST002592
species:
Saruma henryi
miRNA family:
MIRf1481
source:
miRNEST
Taxonomy by NCBI:
Saruma henryi
Saruma
Aristolochiaceae
Piperales
magnoliids
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGATGCTGCATCGGCAATAAG
miRNA*
GTTTGCGGGTGTGGCATCATC
mismatches:
3
bulges:
0
View larger
pre-miRNA
AGATCTCTGTAGAGGGAAGCACAGTCACT
GTTTGCGGGTGTGGCATCATC
AAGATTCACAAAACTTTGAAAGGGGGTGTTGAGTGGCAGTGCATGAGATG
AGGTGGTTGTGGATGGTGGCCCCTCACAGTACCCCCTCGAGATGGGAATCTTGA
TGATGCTGCATCGGCAATAAG
TGACTACTTTTTTAAGCTGCAAACC
A
dot-bracket secondary structure
.......(((((..(((((...(((((((
..((((.((((((((((((((
(((((((.((....(((((..(((((((.((((.(((.((.(((((....
......))))).))....))).))))...)))))))))))).)).)))))))))
)))))))))))).))))..))
)))))...)))))...)))))....
.
SIMILARITIES
miRBase
ptc-MIR172e
:
0.0000000002
PMRD
ptc-miRf11917-akr
:
0.0000000002
microPC
miR172
:
0.00004
UniProt
no hits
RFAM
mir-172: 0.000000003
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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