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ABOUT THIS RECORD

ID: MNEST002593
species: Saruma henryi
miRNA family: MIR172
source: miRNEST

Taxonomy by NCBI:
Saruma henryi Saruma Aristolochiaceae Piperales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGAATCTTGATGATGCTGCAT

miRNA*
GTGGCATCATCAAGATTCACA

mismatches: 1
bulges: 0

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pre-miRNA
AGATCTCTGTAGAGGGAAGCACAGTCACTGTTTGCGGGTGTGGCATCATCAAGATTCACAAAACTTTGAAAGGGGGTGTTGAGTGGCAGTGCATGAGATG
AGGTGGTTGTGGATGGTGGCCCCTCACAGTACCCCCTCGAGATGGGAATCTTGATGATGCTGCATCGGCAATAAGTGACTACTTTTTTAAGCTGCAAACC
A


dot-bracket secondary structure
.......(((((..(((((...(((((((..((((.(((((((((((((((((((((.((....(((((..(((((((.((((.(((.((.(((((....
......))))).))....))).))))...)))))))))))).)).))))))))))))))))))))).))))..)))))))...)))))...)))))....
.



SIMILARITIES
miRBase ptc-MIR172e: 0.0000000002

PMRD ptc-miRf11917-akr: 0.0000000002

microPC miR172: 0.00004
UniProt no hits

RFAM mir-172: 0.000000003
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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