miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST002661
species: Solanum melongena
miRNA family: MIRf968
source: miRNEST

Taxonomy by NCBI:
Solanum melongena Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTGTAAAGCTCAGGAGGGATA

miRNA*
 TCCATCCTGAGTTTCACTGCT

mismatches: 4
bulges: 0
View larger
pre-miRNA
 GTGCTGTCCTTTCTTTCTGTTTTTTCCCTTTCATAAACTATAGTGAAATATTTTAATTTCTGGTGGAAATGCATGGAGAATCTGTAAAGCTCAGGAGGGA
TAGCGCCATGGATGGCTCTCTTTCATCTTCTTACGCATCTCTATAGCGCTATCCATCCTGAGTTTCACTGCTTTCTTATGCTCTCTTTAATGCATCACAT
TTTTTCCCTGTGTATGGTCTAGGTTTCGATGAAGTTGGATTTGCGCAAGG

dot-bracket secondary structure
((((.((((.((((((.(((..(((((...(((.(((.((.((((...)))).)).))).))).))))).))).))))))...((.((((((((((.(((
((((((.(((((..((..................))...))))).))))))))).)))))))))).)).(((((.((..(((.......((((((.....
.........))))))......)))...)).))))).))))..))))....


SIMILARITIES
miRBase gma-MIR390a: 0.00000000000001

PMRD ghr-miR390c: 0.000000000004

microPC miR390: 0.00000001		UniProt no hits

RFAM MIR390: 0.0000000000003		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




Liczniki na strone;