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ABOUT THIS RECORD

ID: MNEST002669
species: Solanum melongena
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Solanum melongena Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGCACTGCCTCTTCCCTGGCT

miRNA*
ACGGGGACGAGACAGAGCATG

mismatches: 4
bulges: 0

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pre-miRNA
AATATGGTGTGGAGTGGATAGACGGGGACGAGACAGAGCATGAGATGTGCAATTTTACTTGCCCATTCCATGCACTGCCTCTTCCCTGGCTCTCCTCTCC
CAACAATCC


dot-bracket secondary structure
....((.((.((((.(((.((.((((((.(((.(((.(((((.((((.((((......)))).)))).))))).))).))).)))))).)).))).))))
)).))....



SIMILARITIES
miRBase csi-MIR408: 0.00000002

PMRD cpt-miR408: 0.00000002

microPC miR408: 0.000001
UniProt no hits

RFAM MIR408: 0.000002
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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