ABOUT THIS RECORDspecies: Solanum melongena
miRNA family: MIR1533
source: miRNEST
Taxonomy by NCBI:
Solanum melongena Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATAATAATAATAATAATGATG miRNA* TCATAATGATCATAATTATTT mismatches: 4 bulges: 0 |
pre-miRNA
TCGCCATCATCATCATAATGATCATAATTATTTCGAGGAGAATAATAATAATAATAATGATGATGACGGGG
dot-bracket secondary structure
...((.((((((((((.((.((.((.(((((((......))))))).)).)).)).)))))))))).))..
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCGCCATCATCATCATAATGATCATAATTATTTCGAGGAGAATAATAATAATAATAATGATGATGACGGGG
dot-bracket secondary structure
...((.((((((((((.((.((.((.(((((((......))))))).)).)).)).)))))))))).))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM mir-598: 0.0009 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
