ABOUT THIS RECORDspecies: Taraxacum kok-saghyz
miRNA family: MIR2911
source: miRNEST
Taxonomy by NCBI:
Taraxacum kok-saghyz Taraxacum Crepidinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGCCGGGGGACGGACTGGGAA miRNA* CCCAGTCCCGAACCCGTCGG mismatches: 5 bulges: 1 |
pre-miRNA
TCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCAGCGGACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCC
GGGGGACGGACTGGGAACGGCTCTTTCGGGGGCCTT
dot-bracket secondary structure
((((...((...)).))))..(((((((((....(((((((((.....((((.((((((..(((((....)))))..))))))....))))..))))).)
)))....)))))))))..((((((....))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCAGCGGACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCC
GGGGGACGGACTGGGAACGGCTCTTTCGGGGGCCTT
dot-bracket secondary structure
((((...((...)).))))..(((((((((....(((((((((.....((((.((((((..(((((....)))))..))))))....))))..))))).)
)))....)))))))))..((((((....))))))..
SIMILARITIES| miRBase peu-MIR2911: 2e-34 PMRD peu-miR2911: 2e-34 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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