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ABOUT THIS RECORD

ID: MNEST002762
species: Triphysaria pusilla
miRNA family: MIR413
source: miRNEST

Taxonomy by NCBI:
Triphysaria pusilla Triphysaria Rhinantheae Orobanchaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATAGTTTCTCTTCTTGATTCT

miRNA*
AAATAAGAAGTTGGACGATGA

mismatches: 4
bulges: 0

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pre-miRNA
CTGACGAACACATAGTTTCTCTTCTTGATTCTCTCTGCAAAATCAAGAAAGCTTACGAGGAGAAGCTATTGAAGAAATCTAATTCCGTTTTGATCAATGA
GATTCAAGTTCGAGAACAGGTTCTTGAGAAATTGAAGTCTCTTGCTAAAAATAAGGATAACGAGATCGCTCGTTTGAGACGAGCCTATAATGATTTGGAA
ACGGGAAATAAGAAGTTGGACGATGAGGTTCGAG


dot-bracket secondary structure
....(((((.(((.((((..(((((((.(((((......((((((.((.(((((........))))).))......((((...(((.(((((..(((.((
(((((((.((((((((....))))))))...))))).))))))).)))))....))).....)))).(((((((...)))))))......))))))....
..))))).)))))))..)))).)))..)))))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q9C099|LRCC1_HUMAN: 0.0004

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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