miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST002768
species:
Triphysaria pusilla
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Triphysaria pusilla
Triphysaria
Rhinantheae
Orobanchaceae
Lamiales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TATTACTCCCTCCGTCCCAAA
miRNA*
TGTCCACGGAGGTAGTATTATA
mismatches:
5
bulges:
1
View larger
pre-miRNA
TGAGATAAC
TATTACTCCCTCCGTCCCAAA
AGGAT
TGTCCACGGAGGTAGTATTATA
TAATGC
dot-bracket secondary structure
.........
((.((((.(((((((..(((.
....)
))...))))))).)))).))..
......
SIMILARITIES
miRBase
bdi-MIR5164
:
0.00004
PMRD
osa-miRf11219-akr
:
0.0002
microPC
miR1439
:
0.0007
UniProt
no hits
RFAM
MIR1122: 0.0002
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record