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ABOUT THIS RECORD

ID: MNEST002773
species: Triphysaria pusilla
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Triphysaria pusilla Triphysaria Rhinantheae Orobanchaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AATACTACCTCCGTCCCAAAA

miRNA*
TTGGGACGGAGGGAGTATAAC

mismatches: 2
bulges: 0

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pre-miRNA
TCAAACTTTAATACTACCTCCGTCCCAAAAGATTGTCCGGTTTTGACTTTTTCAAATATTTAAGAATTTATTGACTTTTATGATGTGAGATTGCGGCGGA
TGAAGACGTCAATGTCTCCCGCCACCGTCCTAGCATCGCGAGAGGGTATCTTTAGGATTTTGTTCAAAAAATAATCAAATTGGACTAGTTTTGGACTAGT
TTTGGGACACTAAAAAGTGTCAAAGTGGAAATCTTTTTGGGACGGAGGGAGTATAACTTTTCT


dot-bracket secondary structure
..........(((((.((((((((((((((((((.((((..((((((((((((((...............))))(((((.((((((.((..((.(((((.
...((((......)))).)))))..))..)).)))))).)))))(((.((((.((((((..((((((((..((.((......)).)).)))))))).)))
))))))).)))..)))).)))))).)))))))).)))))))))))))).))))).........



SIMILARITIES
miRBase tae-MIR1122: 0.00005

PMRD osa-miRf10322-akr: 0.000003

microPC miR1439: 0.00005
UniProt no hits

RFAM MIR1122: 0.00006
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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