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ABOUT THIS RECORD

ID: MNEST002775
species: Triphysaria pusilla
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Triphysaria pusilla Triphysaria Rhinantheae Orobanchaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCATCATCATCATCTCAA

miRNA*
 GAGATGATCAATGATGGTATG

mismatches: 4
bulges: 1
View larger
pre-miRNA
 AATCATCATCATCATCATCTCAATCTCTCTCTCTCTCTCTCTCTCACATACACACCCACAGGTTTATCTTCATTTCTATGTTCCGAACAACTCTTCAGTC
TAGCTCAATTCTTGATTTATTTGCCCCTTCACTTTGTTTTTTTTGCTGCTTCTTTTTTTAAATCGAGGGATTATCAACGAAAAAAAAAAAGAGCCCAACT
AAAAAAATAACTATGTCTTCACCAAGCAAGAGGCGTGAGATGGACTTGATGAAACTGATGATGAGTGATTACAAGGTGGAGATGATCAATGATGGTATG

dot-bracket secondary structure
....((((((((.((((((((.((((.................((((......(((....)))(((((.(((((((..((((...))))..((...((((
((.((((.((((((...............((..((((((((((....((((.(((((((...(((...((...))..)))..))))))).))))......
))))))))))...))...........))))))...)))).)))))).)).)))).))).))))))))).....)))).))))))))..))))))))...


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt sp|P42749|UBC5_ARATH: 0.000006

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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