miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST002779
species: Triticum monococcum
miRNA family: MIR1122
source: miRNEST

Taxonomy by NCBI:
Triticum monococcum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACTCCCTCGGTCCCAAAATA

miRNA*
TTTTGGGACGGAGGGAGTACT

mismatches: 1
bulges: 0

View larger
pre-miRNA
TGTGGTAGCATTCCTCCTAGCTTCATAGTATGGTCTATCTAGCTTGGCTTTTACTCCCTCGGTCCCAAAATAAGTGACACTTATTTTGGGACGGAGGGAG
TACT
TTAATGAATCTGAAGAAGCGTTATGTTT


dot-bracket secondary structure
(((....))).....((.((((..((((......))))..)))).))....(((((((((.((((((((((((((...)))))))))))))).)))))))
))..
.(((((..((....))..))))).....



SIMILARITIES
miRBase osa-MIR1862c: 0.000006

PMRD osa-miRf10381-akr: 0.0000004

microPC miR1439: 0.0000000004
UniProt no hits

RFAM MIR1122: 0.0000001
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;