miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST002779
species:
Triticum monococcum
miRNA family:
MIR1122
source:
miRNEST
Taxonomy by NCBI:
Triticum monococcum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCCCTCGGTCCCAAAATA
miRNA*
TTTTGGGACGGAGGGAGTACT
mismatches:
1
bulges:
0
View larger
pre-miRNA
TGTGGTAGCATTCCTCCTAGCTTCATAGTATGGTCTATCTAGCTTGGCTTT
TACTCCCTCGGTCCCAAAATA
AGTGACACTTA
TTTTGGGACGGAGGGAG
TACT
TTAATGAATCTGAAGAAGCGTTATGTTT
dot-bracket secondary structure
(((....))).....((.((((..((((......))))..)))).))....
(((((((((.(((((((((((
(((...)))))
))))))))).)))))))
))..
.(((((..((....))..))))).....
SIMILARITIES
miRBase
osa-MIR1862c
:
0.000006
PMRD
osa-miRf10381-akr
:
0.0000004
microPC
miR1439
:
0.0000000004
UniProt
no hits
RFAM
MIR1122: 0.0000001
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record