ABOUT THIS RECORDspecies: Triticum turgidum subsp. durum
miRNA family: MIR2033
source: miRNEST
Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATTTCTTTACAGAAGGAGTA miRNA* CTCCCTCTGTAAAGAAATATA mismatches: 1 bulges: 0 |
pre-miRNA
CAGAATCTAGCTTCTAAAAGGTACTCCCTCTGTAAAGAAATATAAAAGCGTTTATTAGATCACTGAAGTAGTGATCTAAATGTTCTTATATTTCTTTACA
GAAGGAGTAACTTGCTAGATGGCATGTAT
dot-bracket secondary structure
....(((((((......(((.((((((.(((((((((((((((((.((((((...((((((((((...)))))))))))))))).)))))))))))))))
)).)))))).)))))))))).........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CAGAATCTAGCTTCTAAAAGGTACTCCCTCTGTAAAGAAATATAAAAGCGTTTATTAGATCACTGAAGTAGTGATCTAAATGTTCTTATATTTCTTTACA
GAAGGAGTAACTTGCTAGATGGCATGTAT
dot-bracket secondary structure
....(((((((......(((.((((((.(((((((((((((((((.((((((...((((((((((...)))))))))))))))).)))))))))))))))
)).)))))).)))))))))).........
SIMILARITIES| miRBase tae-MIR1121: 7e-18 PMRD tae-miR1121: 7e-18 microPC miR1121: 0.00002 | UniProt no hits RFAM MIR1122: 2e-21 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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