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ABOUT THIS RECORD
ID:
MNEST002834
species:
Zamia vazquezii
miRNA family:
MIRf394
source:
miRNEST
Taxonomy by NCBI:
Zamia vazquezii
Zamia
Zamiaceae
Cycadales
Cycadopsida
Cycadophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTTTTAGGTCGAGCTTCCTAT
miRNA*
GGGAAGCTTCCTAAAACTT
mismatches:
1
bulges:
2
View larger
pre-miRNA
AAATGCCAACCAACAAGTTGGAAATGACCTA
GTTTTAGGTCGAGCTTCCTAT
GTTTTAGAGTTTCTTTGATTTTGAAATGC
GGGAAGCTTCCTAAAACTT
GCATTTTCAATAACATAGCTTGTATCTT
dot-bracket secondary structure
................((((((((((....(
((((((((..(((((((((.(
(((((((((((.....)))))))))))).
)))))))))))))))))).
.)))))))))).(((.....))).....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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