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ABOUT THIS RECORD

ID: MNEST002838
species: Zamia vazquezii
miRNA family: MIR535
source: miRNEST

Taxonomy by NCBI:
Zamia vazquezii Zamia Zamiaceae Cycadales Cycadopsida Cycadophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGACGACGAGAGAGAGCACGC

miRNA*
GTGTTCTCGTCCCGTTGTCAGC

mismatches: 1
bulges: 1

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pre-miRNA
TACCGCGCTGTTGACGACGAGAGAGAGCACGCTTGTAGACAATAATATGATTTTGGACGGTTATTACAACGTATTTCTGTGTACATGCGTGTTCTCGTCC
CGTTGTCAGC
AGTAATGA


dot-bracket secondary structure
......(((((((((((((.((((((((((((.((((.(((..((((((...(((...........)))))))))..))).)))).)))))))))).)).
))))))))))
))).....



SIMILARITIES
miRBase rco-MIR535: 0.000001

PMRD rco-miR535: 0.000001

microPC miR535: 4e-50
UniProt no hits

RFAM MIR535: 0.00003
most similar mature miRNAs

Identical with: miR535 from microPC (MNEST044879)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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