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ABOUT THIS RECORD
ID:
MNEST002842
species:
Zingiber officinale
miRNA family:
MIR1525
source:
miRNEST
Taxonomy by NCBI:
Zingiber officinale
Zingiber
Zingiberaceae
Zingiberales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAGTTAATTAAGTTTTTATG
miRNA*
AGGAAATTTGATAACTGTTT
mismatches:
5
bulges:
1
View larger
pre-miRNA
CTAGGGATCCTTGCGAATAAGTTGAATTATGATTTGTTCTT
TGAGTTAATTAAGTTTTTATG
TGTTA
AGGAAATTTGATAACTGTTT
ATAAGGACACTTG
ATACTGTGTTTGCTATTTAGTTGTG
dot-bracket secondary structure
..(((...)))...((((((((((.....))))))))))..
..(((((.((((((((((...
.....
.)))))))))))))))....
.....(((((...
.....))))).(((....)))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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