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ABOUT THIS RECORD

ID: MNEST002844
species: Zingiber officinale
miRNA family: miR1172.1
source: miRNEST

Taxonomy by NCBI:
Zingiber officinale Zingiber Zingiberaceae Zingiberales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGCTTGCAGCAGCAACGGGC

miRNA*
TCCTTGTACTCGTACGCCACC

mismatches: 3
bulges: 2

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pre-miRNA
ATGAGGACGGGGATCTTCTTGTGGACGGGGTTGGCTTGCAGCAGCAACGGGCTCTTGTTGTCCAAGTCCTGCTCCTTGTACTCGTACGCCACCCCTTTCT
CCGCCAGCGCGATCCGGCACC


dot-bracket secondary structure
..........(((((..((.(((((.((((.((((.(((((..((((.((((.((((.....))))....)))).)))).)).))).)))).))))...)
)))).))...)))))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q03666|GSTX4_TOBAC: 0.00000000005

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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