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ABOUT THIS RECORD
ID:
MNEST002844
species:
Zingiber officinale
miRNA family:
miR1172.1
source:
miRNEST
Taxonomy by NCBI:
Zingiber officinale
Zingiber
Zingiberaceae
Zingiberales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGCTTGCAGCAGCAACGGGC
miRNA*
TCCTTGTACTCGTACGCCACC
mismatches:
3
bulges:
2
View larger
pre-miRNA
ATGAGGACGGGGATCTTCTTGTGGACGGGGT
TGGCTTGCAGCAGCAACGGGC
TCTTGTTGTCCAAGTCCTGC
TCCTTGTACTCGTACGCCACC
CCTTTCT
CCGCCAGCGCGATCCGGCACC
dot-bracket secondary structure
..........(((((..((.(((((.((((.
((((.(((((..((((.((((
.((((.....))))....))
)).)))).)).))).)))).)
)))...)
)))).))...)))))......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q03666|GSTX4_TOBAC: 0.00000000005
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record