miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST002850
species: Zinnia violacea
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Zinnia violacea Zinnia Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACATCATCATCATCATCTTCT

miRNA*
TGATGATGATGATGATTTG

mismatches: 1
bulges: 2

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pre-miRNA
GCCTTGTCACAACATCATCATCATCATCTTCTTCTTGTTGTTCTTCCACTTCAACAACATCTTTATTTGCATCTAATTCATGTTCTTCTGCTTTGCCTTT
ATTCCCACCTTGTTTCTTGTGGTCAAGATTCAATGAACCCGGTTCACAATTGTTGACAGAAGCTGGATTCCTTGACACCCACCTGGGATTTCTTTGGATT
CGAGTGGTGGTGGTGATGATGATGATGATTTGGGATCAAC


dot-bracket secondary structure
.(((.((((...((((((((((((((((..((.((((..((((..((((...(((((......((...(((......................)))...)
)........)))))....))))..((((.((((.(((.((((((................)))))).))).))))..(((....)))...)))).)))).
)))).)).)))))))))))))))).))))..)))......



SIMILARITIES
miRBase no hits

PMRD ghr-miR414f: 0.0000002

microPC no hits
UniProt no hits

RFAM mir-598: 0.000004
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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