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ABOUT THIS RECORD
ID:
MNEST002872
species:
Carica papaya
miRNA family:
miR166g
source:
miRNEST
Taxonomy by NCBI:
Carica papaya
Carica
Caricaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGAATGTTGTTTGGCTCGAGG
miRNA*
TCGGACCAGGCTTCATTCCCG
mismatches:
3
bulges:
0
View larger
pre-miRNA
TCTGAGAGGTGGAGGTTAATG
GGAATGTTGTTTGGCTCGAGG
TCATCTGTGATAACCTCTGAAATTTTCTTAGGGGCCTTTTTACTTTCCCGGAAAATTT
CTGCATCTACATACCTCTAGTTGATC
TCGGACCAGGCTTCATTCCCG
TCAACCGAACACTTCTTT
dot-bracket secondary structure
...((((((((..((((.(((
((((((..((((((.((((((
(((.(((...........((((((((((..((((...........)))))))))))))
)................))).)))))
)))).))))))..))))))))
).))))...)))))))).
SIMILARITIES
miRBase
csi-MIR166b
:
0.000000000002
PMRD
zma-miR166n
:
0.00000003
microPC
miR166
:
0.0000005
UniProt
no hits
RFAM
mir-166: 9e-71
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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