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ABOUT THIS RECORD

ID: MNEST002892
species: Carthamus tinctorius
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Carthamus tinctorius Carthamus Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCTCTTCTTCTTCCTCTTCCC

miRNA*
AGAGAGAGAGAGAGAGAGGCA

mismatches: 5
bulges: 0

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pre-miRNA
GAGAGAGAGAGAGAGAGAGGCAGGCAGTTGATTTGATTTCATGGTGGATACTCATCCTCTTCTTCTTCCTCTTCCCATCATCCAT

dot-bracket secondary structure
..(((((.(((((.((((((.((....(((...((....))...)))...))...)))))).))))).)))))............


SIMILARITIES
miRBase zma-MIR166a: 0.001

PMRD zma-miR166a: 0.001

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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