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ABOUT THIS RECORD

ID: MNEST002919
species: Cenchrus ciliaris
miRNA family: MIRf1372
source: miRNEST

Taxonomy by NCBI:
Cenchrus ciliaris Cenchrus Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCGAGCTTCTCGAAGATATCA

miRNA*
TTGTAGCGGGCGAGCTTGGCG

mismatches: 4
bulges: 2

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pre-miRNA
TTGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATATCATTGATGAA

dot-bracket secondary structure
......((.((.(((..((((.(((((((.((((...)))).)))))))))))...))).))..))....


SIMILARITIES
miRBase no hits

PMRD osa-miRf10132-akr: 6e-23

microPC no hits
UniProt sp|Q6ZBP3|H2B2_ORYSJ: 0.000005

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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