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ABOUT THIS RECORD

ID: MNEST002928
species: Centaurea maculosa
miRNA family: MIRf1059
source: miRNEST

Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTTGCTTTGAAGAAGAGAGGG

miRNA*
AGTTCTTTTGAAGCACTGC

mismatches: 4
bulges: 2

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pre-miRNA
AATAGCTACTCAAGTTCCTATATGGTTAGCCGTTGCTTTGAAGAAGAGAGGGAAGTGCACCATTCGCCCTCCGGATTGGATGTCCGTTGAAAAGTTGACT
CAGGTTCTGGAGGCAGAGCGTGACTCTGCTAGTTCTTTTGAAGCACTGCCATTTCACTATGTTGAGATTTCAAGGCT


dot-bracket secondary structure
....((((.(((.((....)).))).))))...((((((..(((((((..((.((..(((..(((..((((((((...((.(((.(((....))).))))
)....))))))))..))).)))...)).))..)))))))))))))..(((((((((......)))))).....))).



SIMILARITIES
miRBase no hits

PMRD ptc-miRf11170-akr: 0.00004

microPC no hits
UniProt sp|Q9C7A8|PSF2_ARATH: 5e-20

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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