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ABOUT THIS RECORD

ID: MNEST002934
species: Centaurea maculosa
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCATCA

miRNA*
ATGGTGGTGATGGTGGTAATG

mismatches: 2
bulges: 0

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pre-miRNA
GGCAACGACAAGATGATGGTGGTGATGGTGGTAATGATAATGAGATGGAGAACGGTTTTGGTGGAAACGTGGTGGTTCCGGAGAGCTTTGAAGAGCAGAT
GATGCTAGCCATGGCGGTTTCACTGGCTGAGGCTCGAGCTAGGACGAGTACACCGGAGGTTGCGTGGATTTAGCGTGCGTGTGTGGGTTGTGTTTTATAC
GGTATGTAAAACAGGAAAGATATAAAAGTGTAGATGGATGATGATGTTTCTTTGAATCAATGGACAGACAGACATATAGGGATTTCAGGGTCTGTATGAT
TGTTTGTTGTTGATGGGGAGATTTGGGTTTGAAAATTGCAAGTTAATCATCATCATCATCATCATCATCTTTTGCCAAA


dot-bracket secondary structure
(((((....(((((((((((((((((((((((.(((...(((...((((..(((.((((((((...((......((((.((.(((((((....((((...
..))))((((((((.....))).))))))))))))...)).))))..)).))))))))....)))...)))).))).))).((((..((.(((((((((.
....))))))))).))....))))((..(((((......(((..((..(((((..(((((((.((((((((.((((((((..........)))))))).)
))))))))))))))..)))))..)).)))......)))))..))....))))))))))))))))))))))))))))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-598: 0.00009
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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