miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST002949
species: Centaurea solstitialis
miRNA family: MIR163
source: miRNEST

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTGATGAGGAGTTGGAACTTG

miRNA*
AGTCTTACTTCTGCTGCTT

mismatches: 3
bulges: 2

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pre-miRNA
GTGATTATGGTGGTGATTATGGTGATGAGGAGTTGGAACTTGGATTAGGGTTGAGTCTTACTTCTGCTGCTTATGCTCCCACCTCTAATG

dot-bracket secondary structure
...((((.(((((.((.(((((((...((((((.(((.(((((.......)))))))).))))))..))).)))).)))))))..)))).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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