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ABOUT THIS RECORD
ID:
MNEST002953
species:
Centaurea solstitialis
miRNA family:
MIR530
source:
miRNEST
Taxonomy by NCBI:
Centaurea solstitialis
Centaurea
Centaureinae
Cardueae
Carduoideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCATTTGCACCTGCACCTTT
miRNA*
GGGTGCAGGACAAGTGCAGG
mismatches:
1
bulges:
1
View larger
pre-miRNA
TTGCCTTTGTC
TGCATTTGCACCTGCACCTTT
CTACCTTTCTTCTCCATCTTCATCTTCTTCACCACCATCATAAGACAATGTGTGTGTGTGTGTGTGTG
TGTGAGTAGGTGGAGAGGTTAAGAAGAAAAGAA
GGGTGCAGGACAAGTGCAGG
CTAAGACA
dot-bracket secondary structure
....(((.(((
((((((((..(((((((((((
((...((((((((((.(((((((((..(((((((((((((((..(((.....))).)))).))).)))
.))))).)))))))))))...))))))))))))
))))))))).))))))))))
).)))...
SIMILARITIES
miRBase
ptc-MIR530a
:
0.00000003
PMRD
ptc-miRf11025-akr
:
0.00000003
microPC
miR1030
:
5e-35
UniProt
no hits
RFAM
MIR530: 0.0000006
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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