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ABOUT THIS RECORD

ID: MNEST003033
species: Brachypodium distachyon
miRNA family: MIR1122
source: miRNEST

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGATACATCCATATTTGGCA

miRNA*
 TCGAAATATTAGATGTATCTAGA

mismatches: 1
bulges: 2
View larger
pre-miRNA
 CCTAAATTGTTGTCGAAATATTAGATGTATCTAGACGCTTTTTAAAAATAGATACATCCATATTTGGCAAATTTGACT

dot-bracket secondary structure
..((((((..((((.((((((..((((((((((...............)))))))))).))))))))))))))))...


SIMILARITIES
miRBase bdi-MIR5183: 3e-16

PMRD bdi-miR1135: 0.00000000000006

microPC miR1135: 0.00006		UniProt no hits

RFAM MIR1122: 3e-25		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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