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ABOUT THIS RECORD

ID: MNEST003047
species: Brachypodium distachyon
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATACTTCCTCCGTCCCATATT

miRNA*
TATGGGACGGAGGGAGTAATA

mismatches: 1
bulges: 0

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pre-miRNA
TCACAAAAGAAATACTTCCTCCGTCCCATATTAAGTGACTCAAATTTGTCCAAATATGGATGCATCTATACCCCAAAAGTGTATAGATGCATGTAATATT
TCGTCACTTAATATGGGACGGAGGGAGTAATAACTACTCC


dot-bracket secondary structure
............(((((((((((((((((((((((((((..((((.(.((((....))))(((((((((((.........))))))))))).)....)))
).)))))))))))))))))))))))))))...........



SIMILARITIES
miRBase bdi-MIR5171: 0.0000000000005

PMRD bdi-miR1135: 0.000007

microPC miR1439: 0.0004
UniProt no hits

RFAM MIR1122: 4e-29
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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