ABOUT THIS RECORDspecies: Citrus clementina
miRNA family: MIRf99
source: miRNEST
Taxonomy by NCBI:
Citrus clementina Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAACCGAACCAAACCGAAAT miRNA* TTCGGTTCAGTTCGGTTCGGT mismatches: 4 bulges: 0 |
pre-miRNA
GAACCTAACCAAATTTAGAAACTGAACCGAACCAAACCGAAATATTTCGGTTCAGTTCGGTTCGGTTTCTAAATTCGGTTCATCT
dot-bracket secondary structure
......((((.(((((((((((((((((((((..(((((((....)))))))..))))))))))))))))))))).)))).....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAACCTAACCAAATTTAGAAACTGAACCGAACCAAACCGAAATATTTCGGTTCAGTTCGGTTCGGTTTCTAAATTCGGTTCATCT
dot-bracket secondary structure
......((((.(((((((((((((((((((((..(((((((....)))))))..))))))))))))))))))))).)))).....
SIMILARITIES| miRBase no hits PMRD ptc-miRf12398-akr: 0.0002 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
