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ABOUT THIS RECORD
ID:
MNEST003154
species:
Helianthus annuus
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Helianthus annuus
Helianthus
Heliantheae
Heliantheae alliance
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCGTCGTCA
miRNA*
AAGTTGATGATGCCGATGGTG
mismatches:
5
bulges:
0
View larger
pre-miRNA
GCTTCCTCTTCATCTTCTGATCCATCATCA
TCATCATCATCATCGTCGTCA
TCTGTACCAAGAAGAGGGCCTTCAAACTGGAGTTCAAAACCGAAGAGCC
AACCCAAGAGGGAAAGAACACAGGAAGAGAAAATTTTTAGAAGAAAGGCGAAGTATTTCTTGATTACTCAGATGGTTGCTGTTCTTGTTTTTTTTAGTCT
TCTTGGTGGATCTGAAGATACTG
AAGTTGATGATGCCGATGGTG
ATGAGGGTTTTGATTATGAATAATAA
dot-bracket secondary structure
........(((((..((.(((((.((((((
(((((..((((((((...(((
(((.(((((((((((.(((((((..................)))).)))
..(((....)))((((((.(((((((.((..((((.((.(((((((.((...)).))))).......)).)).)))).)).))))))).))))))..)))
)))))))).......)))...))
)...))))))))..)))))))
)))))))))..))..)))))......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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