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ABOUT THIS RECORD
ID:
MNEST003155
species:
Helianthus annuus
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Helianthus annuus
Helianthus
Heliantheae
Heliantheae alliance
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCATCATCATCATCATCATCA
miRNA*
ATGCCGATGGTGATGAGGGT
mismatches:
2
bulges:
1
View larger
pre-miRNA
GCTTCCTCTTCATCTTCTGAT
CCATCATCATCATCATCATCA
TCGTCGTCATCTGTACCAAGAAGAGGGCCTTCAAACTGGAGTTCAAAACCGAAGAGCC
AACCCAAGAGGGAAAGAACACAGGAAGAGAAAATTTTTAGAAGAAAGGCGAAGTATTTCTTGATTACTCAGATGGTTGCTGTTCTTGTTTTTTTTAGTCT
TCTTGGTGGATCTGAAGATACTGAAGTTGATG
ATGCCGATGGTGATGAGGGT
TTTGATTATGAATAATAA
dot-bracket secondary structure
........(((((..((.(((
((.(((((((((((..(((((
(((...((((((.(((((((((((.(((((((..................)))).)))
..(((....)))((((((.(((((((.((..((((.((.(((((((.((...)).))))).......)).)).)))).)).))))))).))))))..)))
)))))))).......)))...)))...)))))
)))..)))))))))))))))
)..))..)))))......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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