miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST003189
species: Arabidopsis thaliana
miRNA family: MIRf16
source: miRNEST

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACTCGACCCCCAGGTCGAGT

miRNA*
TCGACCACCAGGTCGAGTAAC

mismatches: 4
bulges: 0

View larger
pre-miRNA
GCGGGGGGAGCCATTCTTCCCACATACTCGACCCCCAGGTCGAGTGACTTTGGAGCCATTCTTCCCATCCACTCGACCACCAGGTCGAGTAACCTCAGCT
CAGGCCACTCGATG


dot-bracket secondary structure
..(((((((.....)))))))...(((((((((....(((((((((.....((((......))))....)))))))))....))))))))).(((.....
.)))..........



SIMILARITIES
miRBase no hits

PMRD ath-miRf10678-akr: 6e-49

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





Liczniki na strone;