ABOUT THIS RECORDspecies: Arabidopsis thaliana
miRNA family: MIRf206
source: miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACCGCCGCCGTGTTCTGTCGA miRNA* GATGGGGCGCGGCGGCGTTNT mismatches: 4 bulges: 0 |
pre-miRNA
CAATCTCCGGCGGATGGGGCGCGGCGGCGTTNTCCTGTGACGCTTGTAAATCAGTTACCGCCGCCGTGTTCTGTCGAGTTGACTCA
dot-bracket secondary structure
.......((((.(((((((((((((((((.....(((..((....))....)))....)))))))))))))))))..)))).....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
Source sequences
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CAATCTCCGGCGGATGGGGCGCGGCGGCGTTNTCCTGTGACGCTTGTAAATCAGTTACCGCCGCCGTGTTCTGTCGAGTTGACTCA
dot-bracket secondary structure
.......((((.(((((((((((((((((.....(((..((....))....)))....)))))))))))))))))..)))).....
SIMILARITIES| miRBase no hits PMRD ath-miRf10311-akr: 8e-29 microPC no hits | UniProt sp|Q9FHH8|COL5_ARATH: 0.000000004 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets
Source sequences
download this record
