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ABOUT THIS RECORD

ID: MNEST003792
species: Oryza sativa
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTCTTCCTCTTCCTCTTCCC

miRNA*
 GAAGCGGTGGAGAAGTGGAT

mismatches: 5
bulges: 1
View larger
pre-miRNA
 ACTTGCTTCCTCCTCTTCCTCTTCCTCTTCCCTCGTCTCCCCGGCGCCACCTGACTGATTGGATTGGTATCGATCCAAGCCTATCAGCCTAGCTAGTGAC
CTGAGTACTCTGCTGTCTGCTGCCTGAATCTGAATCGATCGATCACTCGCTCGCTGCCTGAAGAGAGCAAGAATCGATGGTTGCACGGCGAAGATTGCTA
CACCTTCGCTGATAAATAGCAGAGGACAATCTCATCGGCATCCATGGAGGGCAGCAGCAGCTCGAAGGAGATAGTCGAAGCGGTGGAGAAGTGGATGGCG
TTCC

dot-bracket secondary structure
...((((...(((.((((.(((.((.((((....((((((..(((.....((((....((((((((....)))))))).....))))....))).(((..
.....)))((.((((.(((((((((...((((.....((((((..((.((((.((......)).)))).)).))))))((.(((.(((.((.(((((...
..((((.((((.....)))).)))).))))))).)))))).)).)))))))))))))))))..)).))))))....)))).)).))))))).))).))))
....


SIMILARITIES
miRBase mtr-MIR2673b: 0.0002

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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