miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST003800
species: Oryza sativa
miRNA family: MIR1862
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTAGATTTGTTTATTTTGGAA

miRNA*
CCAAAATAAATGAAACTACTC

mismatches: 3
bulges: 0

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pre-miRNA
TCTCTCTCTCTCTCTCTTCGTCCCAAAATAAATGAAACTACTCCAGTTAGTATGGAACGTGACATATCCCAGTACTTATCTTCAGATTCATAGTATTATG
ATGTGTTACATCTTGTATTAGATTTGTTTATTTTGGAATGTGAGAAATACGTTATCA


dot-bracket secondary structure
............((((..(((.((((((((((((((.(((.((((.......))))..((((((((((..((((((.(((....)))....))))))..)
))))))))).........))).)))))))))))))).))).))))............



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM MIR1122: 0.000002
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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