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ABOUT THIS RECORD

ID: MNEST003816
species: Oryza sativa
miRNA family: MIR446
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CATCAATATGAATATGGCAAA

miRNA*
 TTCCACATTCATATTGATGTT

mismatches: 2
bulges: 0
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pre-miRNA
 AAGATACTTCCTCCGTTTCACAATGGAAGTCATTTTAGCATTTTCCACATTCATATTGATGTTAATGAATTTAGATAGATATATATGTCTAGATATACTT
AACATCAATATGAATATGGCAAATGCTAGCATGACTTATATTGTAAAACGGAGGGAGGACAT

dot-bracket secondary structure
......((((((((((((.((((((.(((((((.(((((((((.(((.(((((((((((((((((((.(((((((((........))))))))).)).))
))))))))))))))).))).))))))))).))))))).)))))).)))))))))))).....


SIMILARITIES
miRBase osa-MIR808: 5e-47

PMRD osa-miR808: 5e-47

microPC miR446: 1e-23		UniProt no hits

RFAM MIR1122: 3e-49		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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